Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015846603.1_cds_XP_016509727.1_22637
CDS Infomation

[gene=LOC107827159] [db_xref=GeneID:107827159] [protein=serine/threonine-protein kinase TOUSLED-like] [protein_id=XP_016509727.1] [location=complement(join(25463..25558,26200..26361,26586..26640,26781..27045,27160..27370,27523..27702,27798..27895,28457..28523,29150..29216,37212..37353,38003..38093))] [gbkey=CDS]
Sequence

ATGGCATGGACTGCTGTTCCACTAGCACTCATGTGGTTTATAATAGAAATGGACCCTGGG
CCTAACTCAACCTCAAAAGTCAGCTCAAAGGTGGTTCATACATATATTTTTATTCTGCAG
AGAACGAAAATAATATCTGAATTATTAATATCTGTTTCAAAAGCTGAGAGGCAAGAGGCA
CGTATGAAAGTGCGACAGGAATCTTTGAGACTGGGTAACGTGGGAGTAATCAGAGCTGGA
ACCATTATTTCTGAGGCCTGGGAAGATGGGCAAGCACTAAAGGACCTCAATGCTCAGCTT
AGAAACTTATTAGAAACTAAAGAAGCTATTGAACGGCAGCGTAAATTGCTCAAGAAACGA
CAACCAGATAAAAGTGATGGAGGAGATGTGGAGGGAGGTTTGCAGGAAGAAGATTCTCTC
ATTCAGGATGAGATCTACAAGTCTCGTTTAGCCAGCATCAAACGTGAGGAAGATGTGATA
ATGCGTGAGAGGGACCGATATGAACTAGAGAAAGGAAGGTTAATTCGTGAAATGAAACGC
ATACGTGATGAAGATGGTTCTCGTTTTAACAATTTTCAGATTTTGAACCACCGATATGCC
CTCTTAAACCTTCTTGGAAAAGGAGGATTTAGTGAGGTGTATAAGGCTTTCGACTTGGTA
GACCATAGATATGTTGCATGTAAGCTACATGGACTAAATGCTCAGTGGAGCGAAGAGAAG
AAGCAAAGTTACATACGGCATGCAATCAGGGAGTACAACATCCATAAGACTTTGGTGCAC
CATCACATTGTGCGGCTTTGGGACATTTTTGAGATAGACCAAAACACATTTTGCACTATC
TTGGAGTACTGTAGTGGAAAGGACCTTGATGCAGTTCTCAAAGCAACACCTGTGTTGCCA
GAAAGAGAAGCAAGGATCATCATTGTGCAGATTTTTCAAGGCCTTGTCTACTTGAATAAA
AAGTCACAGAAGATCATCCATTATGATTTGAAGCCAGGGAATGTTCTGTTTGATGAGTTT
GGCATTGCTAAGTTCACTGATTTTGGCCTTAGCAAGATAGTGGAGGATGATGTTGGATCC
CAGGGCATGGAGCTAACATCCCAGGGAGCTGGAACGTACTGGTACCTTCCTCCTGAATGC
TTTGAGCTAAGCAAGACGCCTCTTATATCCTCAAAGGTTGATGTCTGGTCGGCTGGTATT
TTGTTGTACCAAATGCTGTTTGGTAAACGGCCCTTTGGGCACGACCAGTCACAAGAGAGA
ATACTGAGGGAGGACACCATTATTAAAGCAAGAAAGGTTGAATTCCCTACAAGACCAGCT
GTCTCTAATGAGGCAAAGGAGTTCATTCGTCGTTGTTTAACATATAATCAAGCAGAGAGG
CCAGATGTTTTAAGTATTGCTCAAGACCCTTACTTGACATACACAAAGAAATGA

Peptide Sequence

PEP ID

XP_016509727.1
PEP Infomation

PREDICTED: serine/threonine-protein kinase TOUSLED-like [Nicotiana tabacum]
Sequence

MAWTAVPLALMWFIIEMDPGPNSTSKVSSKVVHTYIFILQRTKIISELLISVSKAERQEA
RMKVRQESLRLGNVGVIRAGTIISEAWEDGQALKDLNAQLRNLLETKEAIERQRKLLKKR
QPDKSDGGDVEGGLQEEDSLIQDEIYKSRLASIKREEDVIMRERDRYELEKGRLIREMKR
IRDEDGSRFNNFQILNHRYALLNLLGKGGFSEVYKAFDLVDHRYVACKLHGLNAQWSEEK
KQSYIRHAIREYNIHKTLVHHHIVRLWDIFEIDQNTFCTILEYCSGKDLDAVLKATPVLP
EREARIIIVQIFQGLVYLNKKSQKIIHYDLKPGNVLFDEFGIAKFTDFGLSKIVEDDVGS
QGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILLYQMLFGKRPFGHDQSQER
ILREDTIIKARKVEFPTRPAVSNEAKEFIRRCLTYNQAERPDVLSIAQDPYLTYTKK

Transcript Sequence

Gene sequence data has not been registered.